Welcome to ArchaeaCast! In our sixth episode, our hosts Priyanka Chatterjee and Dr. Connor Hines discuss the archaea that are very close to home–the ones that can live in and on us! In the second part of the episode, Priyanka interviews Dr. Christine Moissl-Eichinger, from the Medical University of Graz in Austria.

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For nomenclature changes, current nomenclature can be found here

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Sources

Triantafyllou K, Chang C, Pimentel M. 2014. Methanogens, Methane and Gastrointestinal Motility. J Neurogastroenterol Motil 20:31–40.

Probst AJ, Auerbach AK, Moissl-Eichinger C. 2013. Archaea on Human Skin. PLOS ONE 8:e65388.

Matarazzo F, Ribeiro AC, Faveri M, Taddei C, Martinez MB, Mayer MPA. 2012. The domain Archaea in human mucosal surfaces. Clin Microbiol Infect Off Publ Eur Soc Clin Microbiol Infect Dis 18:834–840.

Dridi B, Henry M, Khéchine AE, Raoult D, Drancourt M. 2009. High Prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae Detected in the Human Gut Using an Improved DNA Detection Protocol. PLOS ONE 4:e7063.

Takakura W, Pimentel M. 2020. Small Intestinal Bacterial Overgrowth and Irritable Bowel Syndrome – An Update. Front Psychiatry 11:664.

Hook SE, Wright A-DG, McBride BW. 2010. Methanogens: Methane Producers of the Rumen and Mitigation Strategies. Archaea 2010:945785.

Probiotics: Usefulness and Safety. NCCIH. https://www.nccih.nih.gov/health/probiotics-usefulness-and-safety.

Archaebiotics: Archaea as Pharmabiotics for Treating Chronic Disease in Humans? | IntechOpen. https://www.intechopen.com/chapters/56434.

Kim JY, Whon TW, Lim MY, Kim YB, Kim N, Kwon M-S, Kim J, Lee SH, Choi H-J, Nam I-H, Chung W-H, Kim J-H, Bae J-W, Roh SW, Nam Y-D. 2020. The human gut archaeome: identification of diverse haloarchaea in Korean subjects. Microbiome 8:114.

Moissl-Eichinger C, Probst AJ, Birarda G, Auerbach A, Koskinen K, Wolf P, Holman H-YN. 2017. Human age and skin physiology shape diversity and abundance of Archaea on skin. Sci Rep 7:4039.

Bovaer®. @anh. https://www.dsm-firmenich.com/anh/products-and-services/products/methane-inhibitors/bovaer.html.

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We’d love to hear from you! Contact us at archaeacast@gmail.com

Welcome to ArchaeaCast! In our fifth episode, our hosts Priyanka Chatterjee and Dr. Connor Hines talk about Acidophiles, the heavy metal rockin’ Archaea! In the second part of the episode, Connor Hines interviews Prof. Paul Blum, from the University of Nebraska Lincoln.

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Article link for: “Yellowstone National Park Death: Oregon Man Died In Acidic Hot Spring Trying To ‘Hot Pot’”

Video showing Cans dissolving in Acid

Sacki Dog Meme

Picture of “Ferroplasma acidiphilum”

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For nomenclature changes, current nomenclature can be found here

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Sources

Howland, J. L. (2000). The surprising archaea: discovering another domain of life. Oxford University Press. ISBN: 9780195111835

Chen, Lanming, et al. "The genome of Sulfolobus acidocaldarius, a model organism of the Crenarchaeota."

Ferrer, Manuel, et al. "The cellular machinery of Ferroplasma acidiphilum is iron-protein-dominated."

McCarthy, Samuel, et al. "Expanding the limits of thermoacidophily in the archaeon Sulfolobus solfataricus by adaptive evolution."

Krzmarzick, Mark James, et al. "Diversity and niche of archaea in bioremediation."

Rastädter, Kerstin, et al. "The cell membrane of Sulfolobus spp.-homeoviscous adaption and biotechnological applications."

Baker-Austin, Craig, and Mark Dopson. "Life in acid: pH homeostasis in acidophiles."

Mikael Sehlin, H. B. L. E., and E. Börje Lindström. "Oxidation and reduction of arsenic by Sulfolobus acidocaldarius strain BC."

“Abandoned Mine Drainage”

“Where do acid-sulfate hot springs come from and why are they important?”

Nordstrom, D. Kirk, James W. Ball, and R. Blaine McCleskey. "Ground water to surface water: chemistry of thermal outflows in Yellowstone National Park." Geothermal biology and geochemistry in Yellowstone National Park (2005): 73-94.

Welcome to ArchaeaCast! In our fourth episode, our hosts Dr. Connor Hines and Dr. Alex Philips talk about Thermophiles, the Archaea which are almost too hot to handle! In the second part of the episode, Theopi Rados interviews Prof. Rachel Whitaker, from the University of Illinois at Urbana-Champaign.

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Picture of Pyrococcus furiosus

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For nomenclature changes, current nomenclature can be found here

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Sources

Atomi, Haruyuki, et al. 2004. https://doi.org/10.1128/jb.186.14.4829-4833.2004

Boyd, Eric S., et al. 2013. https://doi.org/10.3389/fmicb.2013.00062

Brochier-Armanet, et al. 2006. https://doi.org/10.1155/2006/582916

Charles-Orszag, et al. 2021. https://doi.org/10.3389/fmicb.2021.707124

Charles-Orszag, Arthur, et al. 2023. https://doi.org/10.1016/j.bpj.2022.11.1527

Erauso, Gaël, et al. 1993. https://doi.org/10.1007/BF00252219

Fiala, Gerhard, and Karl O. Stetter. 1986. https://doi.org/10.1007/BF00413027

Forterre, Patrick. 2002. https://doi.org/10.1016/S0168-9525(02)02650-1

Fröls, Sabrina, et al. 2007. https://doi.org/10.1128/jb.01016-07

Grogan, Dennis W., Geraldine T. Carver, and John W. Drake. 2001. https://doi.org/10.1073/pnas.141113098

Han, Wenyuan, et al. 2017. https://doi.org/10.3390/ijms18071340

Hsieh, Tao-shih, and Jody L. Plank. 2006. https://doi.org/10.1074/jbc.M513252200

Mackwan, Reena R, et al. 2008. https://doi.org/10.1534/genetics.108.089086.

Pulschen, Andre Arashiro, et al. 2020. https://doi.org/10.1016/j.bpj.2022.11.1527

Russell, M. J., A. J. Hall, and W. Martin. 2010. https://doi.org/10.1111/j.1472-4669.2010.00249.x

Wolferen, Marleen van, et al. 2020. https://doi.org/10.1128/mbio.03014-19

Yang, Xi, et al. 2020. https://doi.org/10.1073/pnas.1921848117